Package: babelmixr2 0.1.5.9000

Matthew Fidler

babelmixr2: Use 'nlmixr2' to Interact with Open Source and Commercial Software

Run other estimation and simulation software via the 'nlmixr2' (Fidler et al (2019) <doi:10.1002/psp4.12445>) interface including 'PKNCA', 'NONMEM' and 'Monolix'. While not required, you can get/install the 'lixoftConnectors' package in the 'Monolix' installation, as described at the following url <https://monolixsuite.slp-software.com/r-functions/2024R1/installation-and-initialization>. When 'lixoftConnectors' is available, 'Monolix' can be run directly instead of setting up command line usage.

Authors:Matthew Fidler [aut, cre], Bill Denney [aut], Theodoros Papathanasiou [ctb], Nook Fulloption [ctb]

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babelmixr2.pdf |babelmixr2.html✨
babelmixr2/json (API)
NEWS

# Install 'babelmixr2' in R:
install.packages('babelmixr2', repos = c('https://nlmixr2.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/nlmixr2/babelmixr2/issues

Uses libs:
  • c++– GNU Standard C++ Library v3

On CRAN:

monolixnonmempharmacometrics

5.83 score 8 stars 53 scripts 795 downloads 48 exports 156 dependencies

Last updated 2 days agofrom:7551076fc3. Checks:OK: 3 NOTE: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 21 2024
R-4.5-win-x86_64OKNov 21 2024
R-4.5-linux-x86_64OKNov 21 2024
R-4.4-win-x86_64NOTENov 21 2024
R-4.4-mac-x86_64NOTENov 21 2024
R-4.4-mac-aarch64NOTENov 21 2024
R-4.3-win-x86_64NOTENov 21 2024
R-4.3-mac-x86_64NOTENov 21 2024
R-4.3-mac-aarch64NOTENov 21 2024

Exports:.minfo.popedCluster.popedF.popedFree.popedRxRunSetup.popedSolveIdME.popedSolveIdME2.popedWas.nlmixras.nlmixr2as.nonmem2rxbabel.poped.databasebabelBpopIdxbblDatToMonolixbblDatToMrgsolvebblDatToNonmembblDatToPkncabblDatToRxodegetStandardColNamesgetValidNlmixrCtlmlxtranmodelUnitConversionmonolix2rxmonolixControlnlmixr2EstnmcovnmextnmGetDistributionMonolixLinesnmGetDistributionNonmemLinesnminfonmObjGetControlnmObjGetFoceiControlnmObjHandleControlObjectnmtabnmxmlnonmem2rxnonmemControlpkncaControlpopedControlpopedGetMultipleEndpointModelingTimespopedMultipleEndpointIndexDataFramepopedMultipleEndpointParampopedMultipleEndpointResetTimeIndexrxModelVarsrxToMonolixrxToNonmemrxUiGetsimplifyUnit

Dependencies:askpassassertthatbackportsbase64encBHbinombitbit64bitopsbootbslibcachemcellrangercheckmateclassclassIntclicliprclustercolorspacecommonmarkcpp11cpp11armadillocrayoncurldata.tableDerivDescToolsdigestdparserdplyre1071evaluateExactexpmfansifarverfastmapfontawesomeforcatsforeignFormulafsgenericsggforceggplot2ggtextgldgluegridExtragridtextgtablehavenhighrHmischmshtmlTablehtmltoolshtmlwidgetshttrinlineisobandjpegjquerylibjsonliteKernSmoothknitrlabelinglatticelazyevallbfgsb3clifecyclelmomlotrimagrittrmarkdownMASSMatrixmemoisemgcvmimeminpack.lmminqamonolix2rxmunsellmvtnormn1qn1nlmenlmixr2nlmixr2datanlmixr2estnlmixr2extranlmixr2plotnnetnonmem2rxnumDerivopensslpanderpillarpkgconfigpngpolyclipPreciseSumsprettyunitsprogressproxypurrrqsR6RApiSerializerappdirsRColorBrewerRcppRcppArmadilloRcppEigenRcppParallelRCurlreadrreadxlrematchrexrlangrmarkdownrootSolverpartrstudioapirxode2rxode2llsassscalessitmoStanHeadersstringfishstringistringrsurvivalsymenginesyssystemfontstibbletidyrtidyselecttinytextweenrtzdbutf8vctrsviridisviridisLitevpcvroomwithrxfunxgxrxml2yaml