Package: rxode2lincmt 0.1.0

Matthew L. Fidler

rxode2lincmt: Linear Compartment Model Solutions and Gradients for 'rxode2'

Analytic one, two and three compartment linear pharmacokinetic solutions with their parameter gradients from 'stan' automatic differentiation (Carpenter et al (2015) <doi:10.48550/arXiv.1509.07164>), eigen decompositions and derived-parameter conversions used by 'rxode2' (Wang, Hallow and James (2016) <doi:10.1002/psp4.12052>). Split out of 'rxode2' so its installation does not compile 'stan' AD items which made it take too long to compile by itself. The closed-form solutions follow the idea of the 'wnl' package (Bae, <https://CRAN.R-project.org/package=wnl>), though the implementation here is different.

Authors:Matthew L. Fidler [aut, cre], Richard Upton [ctb]

rxode2lincmt_0.1.0.tar.gz
rxode2lincmt_0.1.0.zip(r-4.7-x86_64)rxode2lincmt_0.1.0.zip(r-4.7-arm64)rxode2lincmt_0.1.0.zip(r-4.6-x86_64)rxode2lincmt_0.1.0.zip(r-4.6-arm64)rxode2lincmt_0.1.0.zip(r-4.5-x86_64)
rxode2lincmt_0.1.0.tgz(r-4.6-x86_64)rxode2lincmt_0.1.0.tgz(r-4.6-arm64)rxode2lincmt_0.1.0.tgz(r-4.5-x86_64)rxode2lincmt_0.1.0.tgz(r-4.5-arm64)
rxode2lincmt_0.1.0.tar.gz(r-4.7-arm64)rxode2lincmt_0.1.0.tar.gz(r-4.7-x86_64)rxode2lincmt_0.1.0.tar.gz(r-4.6-arm64)rxode2lincmt_0.1.0.tar.gz(r-4.6-x86_64)
rxode2lincmt_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
rxode2lincmt/json (API)

# Install 'rxode2lincmt' in R:
install.packages('rxode2lincmt', repos = c('https://nlmixr2.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/nlmixr2/rxode2lincmt/issues

Pkgdown/docs site:https://nlmixr2.github.io

Uses libs:
  • c++– GNU Standard C++ Library v3

On CRAN:

Conda:

cpp

1.70 score 17 exports 7 dependencies

Last updated from:c716a4c6eb. Checks:2 ERROR, 13 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64ERROR364
linux-devel-x86_64OK305
source / vignettesOK333
linux-release-arm64ERROR351
linux-release-x86_64OK271
macos-release-arm64OK427
macos-release-x86_64OK1378
macos-oldrel-arm64OK270
macos-oldrel-x86_64OK1061
windows-devel-arm64OK331
windows-devel-x86_64OK467
windows-release-arm64OK334
windows-release-x86_64OK392
windows-oldrel-x86_64OK445
wasm-releaseOK186

Exports:.calcDerived.linCmtBSensTypesSeen.linCmtBThreadsSeen.linCmtCarryFastStats.linCmtCarryLiveTest.linCmtCarrySentinelMax.linCmtCarrySetFast.linCmtDeltaMemo.linCmtSeqStats.rxode2lincmtHostFieldNames.rxode2lincmtHostInfo.rxode2lincmtIniHost.rxode2lincmtPtrlinCmtMicroslinCmtModelDoublesolComp2solComp3

Dependencies:backportsBHcheckmateRcppRcppEigenRcppParallelStanHeaders