{ "_id": "6ad8135f69e274306bae8c4d", "Package": "rxode2lincmt", "Version": "0.1.1", "Title": "Linear Compartment Model Solutions and Gradients for 'rxode2'", "Authors@R": "c(\nperson(\"Matthew L.\", \"Fidler\", role = c(\"aut\", \"cre\"),\nemail = \"matthew.fidler@gmail.com\",\ncomment = c(ORCID = \"0000-0001-8538-6691\")),\nperson(\"Richard\", \"Upton\", role = \"ctb\"))", "Maintainer": "Matthew L. Fidler ", "Description": "Analytic one, two and three compartment linear\npharmacokinetic solutions with their parameter gradients from\n'stan' automatic differentiation (Carpenter et al (2015)\n), eigen decompositions and\nderived-parameter conversions used by 'rxode2' (Wang, Hallow\nand James (2016) ). Split out of\n'rxode2' so its installation does not compile 'stan' AD items\nwhich made it take too long to compile by itself. The\nclosed-form solutions follow the idea of the 'wnl' package\n(Bae, ), though the\nimplementation here is different.", "BugReports": "https://github.com/nlmixr2/rxode2lincmt/issues/", "NeedsCompilation": "yes", "License": "GPL (>= 3)", "URL": "https://nlmixr2.github.io/rxode2lincmt/,\nhttps://github.com/nlmixr2/rxode2lincmt/", "Biarch": "true", "Encoding": "UTF-8", "Language": "en-US", "Roxygen": "list(markdown = TRUE)", "Config/testthat/edition": "3", "Config/roxygen2/version": "8.1.0", "Config/pak/sysreqs": "cmake make", "Repository": "https://nlmixr2.r-universe.dev", "Date/Publication": "2026-10-20 23:23:39 UTC", "RemoteUrl": "https://github.com/nlmixr2/rxode2lincmt", "RemoteRef": "HEAD", "RemoteSha": "1b49c981f6610eaaf053836c2cfc9b30f20c9b29", "Packaged": { "Date": "2026-10-21 00:48:38 UTC", "User": "root" }, "Author": "Matthew L. Fidler [aut, cre] (ORCID:\n),\nRichard Upton [ctb]", "_user": "nlmixr2", "_type": "src", "_file": "rxode2lincmt_0.1.1.tar.gz", "_fileid": "https://r2.ropensci.org/221f07942960b31b0edbf109f545672a1d78de5b5b0dde9a6662cc5edfb02c00", "_filesize": 192607, "_sha256": "221f07942960b31b0edbf109f545672a1d78de5b5b0dde9a6662cc5edfb02c00", "_expires": "2027-01-29T01:20:28.000Z", "_created": "2026-10-21T00:48:38.000Z", "_published": "2026-10-21T01:20:30.869Z", "_buildurl": "https://github.com/r-universe/nlmixr2/actions/runs/39523208181", "_status": "success", "_host": "GitHub-Actions", "_jobs": [ { "job": 118973623949, "time": 313, "config": "linux-devel-arm64", "r": "4.7.0", "check": "ERROR", "artifact": "12312339032" }, { "job": 118973623925, "time": 307, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "12311374279" }, { "job": 118973623887, "time": 323, "config": "linux-release-arm64", "r": "4.6.1", "check": "ERROR", "artifact": "12312328845" }, { "job": 118973623840, "time": 253, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "12312448527" }, { "job": 118973623876, "time": 292, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "12311214069" }, { "job": 118973623889, "time": 1740, "config": "macos-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "12313807720" }, { "job": 118973623847, "time": 472, "config": "macos-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "12311604351" }, { "job": 118973623834, "time": 1234, "config": "macos-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "12312781734" }, { "job": 118971811372, "time": 335, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "12311723461" }, { "job": 118973623943, "time": 192, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "12311238851" }, { "job": 118973623901, "time": 358, "config": "windows-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "12312343962" }, { "job": 118973623849, "time": 379, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "12311384278" }, { "job": 118973623877, "time": 378, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "12311539297" }, { "job": 118973623907, "time": 351, "config": "windows-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "12311659046" }, { "job": 118973623964, "time": 399, "config": "windows-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "12311854549" } ], "_upstream": "https://github.com/nlmixr2/rxode2lincmt", "_commit": { "id": "1b49c981f6610eaaf053836c2cfc9b30f20c9b29", "author": "Matthew Fidler ", "committer": "GitHub ", "message": "Merge pull request #3 from nlmixr2/issue-2\n\nlinCmtB: faster per-row path in FOCEi fits (memo that hits, thin calc_lhs path)", "time": 1792538619 }, "_maintainer": { "name": "Matthew L. Fidler", "email": "matthew.fidler@gmail.com", "login": "mattfidler", "description": "Also a Novartis employee; Can reach me at my Novartis email: matt.fidler@novartis.com", "uuid": 514778, "orcid": "0000-0001-8538-6691" }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1.0", "role": "Depends" }, { "package": "Rcpp", "version": ">= 1.0.8", "role": "LinkingTo" }, { "package": "RcppEigen", "version": ">= 0.3.3.9.2", "role": "LinkingTo" }, { "package": "StanHeaders", "version": ">= 2.21.0.7", "role": "LinkingTo" }, { "package": "BH", "role": "LinkingTo" }, { "package": "RcppParallel", "role": "LinkingTo" }, { "package": "Rcpp", "version": ">= 1.0.8", "role": "Imports" }, { "package": "checkmate", "role": "Imports" }, { "package": "covr", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" } ], "_owner": "nlmixr2", "_selfowned": true, "_usedby": 15, "_updates": [ { "week": "2026-38", "n": 20 }, { "week": "2026-43", "n": 2 } ], "_tags": [], "_stars": 0, "_contributors": [ { "user": "mattfidler", "count": 34, "uuid": 514778 } ], "_userbio": { "uuid": 94710774, "type": "organization", "name": "nlmixr2", "followers": 64 }, "_downloads": { "count": 931, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/rxode2lincmt" }, "_devurl": "https://github.com/nlmixr2/rxode2lincmt", "_pkgdown": "https://nlmixr2.github.io/rxode2lincmt/", "_searchresults": 0, "_topics": [ "cpp" ], "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "extra/rxode2lincmt.html" ], "_homeurl": "https://github.com/nlmixr2/rxode2lincmt", "_realowner": "nlmixr2", "_cranurl": true, "_releases": [ { "version": "0.1.0", "date": "2026-09-24" } ], "_exports": [ ".calcDerived", ".linCmtBSensTypesSeen", ".linCmtBThreadsSeen", ".linCmtCarryFastStats", ".linCmtCarryLiveTest", ".linCmtCarrySentinelMax", ".linCmtCarrySetFast", ".linCmtDeltaMemo", ".linCmtSeqStats", ".rxode2lincmtHostFieldNames", ".rxode2lincmtHostInfo", ".rxode2lincmtIniHost", ".rxode2lincmtPtr", "linCmtMicros", "linCmtModelDouble", "solComp2", "solComp3" ], "_help": [ { "page": "linCmtMicros", "title": "Micro-constants of a linear compartment model", "topics": [ "linCmtMicros" ] }, { "page": "linCmtModelDouble", "title": "Advance a linear compartment model by one step", "topics": [ "linCmtModelDouble" ] }, { "page": "solComp2", "title": "Eigenvalues and coefficients of the two compartment model", "topics": [ "solComp2" ] }, { "page": "solComp3", "title": "Eigenvalues and coefficients of the three compartment model", "topics": [ "solComp3" ] } ], "_readme": "https://github.com/nlmixr2/rxode2lincmt/raw/HEAD/README.md", "_rundeps": [ "backports", "BH", "checkmate", "Rcpp", "RcppEigen", "RcppParallel", "StanHeaders" ], "_sysdeps": [ { "shlib": "libstdc++", "package": "libstdc++6", "source": "gcc", "version": "16-20260322-1ubuntu1", "name": "c++", "homepage": "http://gcc.gnu.org/", "description": "GNU Standard C++ Library v3" } ], "_score": 4.653212513775344, "_indexed": true, "_nocasepkg": "rxode2lincmt", "_universes": [ "nlmixr2", "mattfidler" ], "_previous": "0.1.0", "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.1", "date": "2026-10-21T00:52:35.000Z", "distro": "resolute", "arch": "aarch64", "commit": "1b49c981f6610eaaf053836c2cfc9b30f20c9b29", "fileid": "https://r2.ropensci.org/7e19b22d4e3a4d0441ff6f7ecff38a8f6ecd82a7a82aa9370bf81819d11cbb39", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/nlmixr2/actions/runs/39523208181" }, { "r": "4.7.0", "os": "linux", "version": "0.1.1", "date": "2026-10-21T00:52:55.000Z", "distro": "resolute", "arch": "x86_64", "commit": "1b49c981f6610eaaf053836c2cfc9b30f20c9b29", "fileid": "https://r2.ropensci.org/d3f6c34e725a23a0b562511e1125f61d83e782c4fdfe0a4b0b8110250fcf591d", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/nlmixr2/actions/runs/39523208181" }, { "r": "4.6.1", "os": "linux", "version": "0.1.1", "date": "2026-10-21T00:52:41.000Z", "distro": "resolute", "arch": "aarch64", "commit": "1b49c981f6610eaaf053836c2cfc9b30f20c9b29", "fileid": "https://r2.ropensci.org/9646834db7f125f4cb51b121e7c8683cee0199c47c174db98439223420c39c82", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/nlmixr2/actions/runs/39523208181" }, { "r": "4.6.1", "os": "linux", "version": "0.1.1", "date": "2026-10-21T00:52:53.000Z", "distro": "resolute", "arch": "x86_64", "commit": "1b49c981f6610eaaf053836c2cfc9b30f20c9b29", "fileid": "https://r2.ropensci.org/c10a15a7cfa4c629700b8ae3cd5271fa52e12b5ce36b63c358514bdc4c502885", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/nlmixr2/actions/runs/39523208181" }, { "r": "4.5.3", "os": "mac", "version": "0.1.1", "date": "2026-10-21T00:52:17.000Z", "arch": "aarch64", "commit": "1b49c981f6610eaaf053836c2cfc9b30f20c9b29", "fileid": "https://r2.ropensci.org/300b9989523f9dc4ef755e34943e970215f5cc9f2b3c055b0c1bfce3c017127e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/nlmixr2/actions/runs/39523208181" }, { "r": "4.5.3", "os": "mac", "version": "0.1.1", "date": "2026-10-21T00:55:33.000Z", "arch": "x86_64", "commit": "1b49c981f6610eaaf053836c2cfc9b30f20c9b29", "fileid": "https://r2.ropensci.org/146967123ca2fb47b1110587d2826091b3e1e2da3c96227dfa9613891410fb11", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/nlmixr2/actions/runs/39523208181" }, { "r": "4.6.1", "os": "mac", "version": "0.1.1", "date": "2026-10-21T00:52:35.000Z", "arch": "aarch64", "commit": "1b49c981f6610eaaf053836c2cfc9b30f20c9b29", "fileid": "https://r2.ropensci.org/d0fc7d37301201347237cf7fd9bd3be6218971faa5b4ca14a8aa3e04e958185d", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/nlmixr2/actions/runs/39523208181" }, { "r": "4.6.1", "os": "mac", "version": "0.1.1", "date": "2026-10-21T00:53:45.000Z", "arch": "x86_64", "commit": "1b49c981f6610eaaf053836c2cfc9b30f20c9b29", "fileid": "https://r2.ropensci.org/636e8bf2c12fd8d3c7b1df4e8fed4b37e548b84e4ee1eaf9491405879b2c2d70", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/nlmixr2/actions/runs/39523208181" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.1", "date": "2026-10-21T00:52:57.000Z", "arch": "emscripten", "commit": "1b49c981f6610eaaf053836c2cfc9b30f20c9b29", "fileid": "https://r2.ropensci.org/4bcc4a4cf29d568d327a5af5d16ce90c1f8fd729a7db1864200c5687f9b622b1", "status": "success", "buildurl": "https://github.com/r-universe/nlmixr2/actions/runs/39523208181" }, { "r": "4.7.0", "os": "win", "version": "0.1.1", "date": "2026-10-21T00:54:24.000Z", "arch": "aarch64", "commit": "1b49c981f6610eaaf053836c2cfc9b30f20c9b29", "fileid": "https://r2.ropensci.org/c80ebd15ebf7f9399fa4c9c763b5b60072f6d68001069014bd832ccc2401a91a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/nlmixr2/actions/runs/39523208181" }, { "r": "4.7.0", "os": "win", "version": "0.1.1", "date": "2026-10-21T00:52:22.000Z", "arch": "x86_64", "commit": "1b49c981f6610eaaf053836c2cfc9b30f20c9b29", "fileid": "https://r2.ropensci.org/0f91f409ff8499f5fc5454d655445259c0472bbd6908885b9a70cd4198ab4ce3", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/nlmixr2/actions/runs/39523208181" }, { "r": "4.5.3", "os": "win", "version": "0.1.1", "date": "2026-10-21T00:52:16.000Z", "arch": "x86_64", "commit": "1b49c981f6610eaaf053836c2cfc9b30f20c9b29", "fileid": "https://r2.ropensci.org/83509e299bf1effd1c5662fe823e5c41994460088dfa1986f20a1a47add7c481", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/nlmixr2/actions/runs/39523208181" }, { "r": "4.6.1", "os": "win", "version": "0.1.1", "date": "2026-10-21T00:54:20.000Z", "arch": "aarch64", "commit": "1b49c981f6610eaaf053836c2cfc9b30f20c9b29", "fileid": "https://r2.ropensci.org/171ea80c10d0285b0dd5a015239e86216dc42664de6c2b82a1fb7e337869231b", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/nlmixr2/actions/runs/39523208181" }, { "r": "4.6.1", "os": "win", "version": "0.1.1", "date": "2026-10-21T00:52:24.000Z", "arch": "x86_64", "commit": "1b49c981f6610eaaf053836c2cfc9b30f20c9b29", "fileid": "https://r2.ropensci.org/9333cb59e9b92698921826c603b7bf64a7300626c9a0baa20a66ffadf678efe8", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/nlmixr2/actions/runs/39523208181" } ] }