Package: monolix2rx 0.0.6

Matthew Fidler

monolix2rx: Converts 'Monolix' Models to 'rxode2'

'Monolix' is a tool for running mixed effects model using 'saem'. This tool allows you to convert 'Monolix' models to 'rxode2' (Wang, Hallow and James (2016) <doi:10.1002/psp4.12052>) using the form compatible with 'nlmixr2' (Fidler et al (2019) <doi:10.1002/psp4.12445>). If available, the 'rxode2' model will read in the 'Monolix' data and compare the simulation for the population model individual model and residual model to immediately show how well the translation is performing. This saves the model development time for people who are creating an 'rxode2' model manually. Additionally, this package reads in all the information to allow simulation with uncertainty (that is the number of observations, the number of subjects, and the covariance matrix) with a 'rxode2' model. This is complementary to the 'babelmixr2' package that translates 'nlmixr2' models to 'Monolix' and can convert the objects converted from 'monolix2rx' to a full 'nlmixr2' fit. While not required, you can get/install the 'lixoftConnectors' package in the 'Monolix' installation, as described at the following url <https://monolixsuite.slp-software.com/r-functions/2024R1/installation-and-initialization>. When 'lixoftConnectors' is available, 'Monolix' can be used to load its model library instead manually setting up text files (which only works with old versions of 'Monolix').

Authors:Matthew Fidler [aut, cre], Justin Wilkins [ctb]

monolix2rx_0.0.6.tar.gz
monolix2rx_0.0.6.zip(r-4.7)monolix2rx_0.0.6.zip(r-4.6)monolix2rx_0.0.6.zip(r-4.5)
monolix2rx_0.0.6.tgz(r-4.6-x86_64)monolix2rx_0.0.6.tgz(r-4.6-arm64)monolix2rx_0.0.6.tgz(r-4.5-x86_64)monolix2rx_0.0.6.tgz(r-4.5-arm64)
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monolix2rx_0.0.6.tgz(r-4.6-emscripten)
manual.pdf |manual.html
DESCRIPTION |NEWS
card.svg |card.png
monolix2rx/json (API)

# Install 'monolix2rx' in R:
install.packages('monolix2rx', repos = c('https://nlmixr2.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/nlmixr2/monolix2rx/issues

Pkgdown/docs site:https://nlmixr2.github.io

Uses libs:
  • c++– GNU Standard C++ Library v3

On CRAN:

Conda:

monolixnlmixr2pharmacometricsrxode2cpp

4.03 score 1 stars 1 packages 18 scripts 449 downloads 20 exports 55 dependencies

Last updated from:ca1ffea087. Checks:13 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK669
linux-devel-x86_64OK686
source / vignettesOK666
linux-release-arm64OK662
linux-release-x86_64OK659
macos-release-arm64OK130
macos-release-x86_64OK307
macos-oldrel-arm64OK184
macos-oldrel-x86_64OK314
windows-develOK278
windows-releaseOK239
windows-oldrelOK224
wasm-releaseOK735

Exports:.getNbdoses.getStiff.monolixGetMlxtran%>%autoplotexpitinilogitlotrimlxtranmlxTxtmodelmodel<-monolix2rxrxodeRxODErxode2rxRenamerxSolverxUiGet

Dependencies:armadillo4rbackportsbase64encBHcachemcheckmateclicpp11cpp4rcrayondata.tabledigestdparserfarverfastmapggforceggplot2gluegtableinlineisobandjsonlitelabelinglifecyclelotrimagrittrMASSmemoisepolyclipPreciseSumsqs2R6RColorBrewerRcppRcppArmadilloRcppEigenRcppParallelrexrlangrxode2rxode2llS7scalessitmoStanHeadersstringfishstringisundialrsyssystemfontstidyselecttweenrvctrsviridisLitewithr