Package: monolix2rx 0.0.6

Matthew Fidler

monolix2rx: Converts 'Monolix' Models to 'rxode2'

'Monolix' is a tool for running mixed effects model using 'saem'. This tool allows you to convert 'Monolix' models to 'rxode2' (Wang, Hallow and James (2016) <doi:10.1002/psp4.12052>) using the form compatible with 'nlmixr2' (Fidler et al (2019) <doi:10.1002/psp4.12445>). If available, the 'rxode2' model will read in the 'Monolix' data and compare the simulation for the population model individual model and residual model to immediately show how well the translation is performing. This saves the model development time for people who are creating an 'rxode2' model manually. Additionally, this package reads in all the information to allow simulation with uncertainty (that is the number of observations, the number of subjects, and the covariance matrix) with a 'rxode2' model. This is complementary to the 'babelmixr2' package that translates 'nlmixr2' models to 'Monolix' and can convert the objects converted from 'monolix2rx' to a full 'nlmixr2' fit. While not required, you can get/install the 'lixoftConnectors' package in the 'Monolix' installation, as described at the following url <https://monolixsuite.slp-software.com/r-functions/2024R1/installation-and-initialization>. When 'lixoftConnectors' is available, 'Monolix' can be used to load its model library instead manually setting up text files (which only works with old versions of 'Monolix').

Authors:Matthew Fidler [aut, cre], Justin Wilkins [ctb]

monolix2rx_0.0.6.tar.gz
monolix2rx_0.0.6.zip(r-4.7)monolix2rx_0.0.6.zip(r-4.6)monolix2rx_0.0.6.zip(r-4.5)
monolix2rx_0.0.6.tgz(r-4.6-x86_64)monolix2rx_0.0.6.tgz(r-4.6-arm64)monolix2rx_0.0.6.tgz(r-4.5-x86_64)monolix2rx_0.0.6.tgz(r-4.5-arm64)
monolix2rx_0.0.6.tar.gz(r-4.7-arm64)monolix2rx_0.0.6.tar.gz(r-4.7-x86_64)monolix2rx_0.0.6.tar.gz(r-4.6-arm64)monolix2rx_0.0.6.tar.gz(r-4.6-x86_64)
monolix2rx_0.0.6.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
monolix2rx/json (API)
NEWS

# Install 'monolix2rx' in R:
install.packages('monolix2rx', repos = c('https://nlmixr2.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/nlmixr2/monolix2rx/issues

Pkgdown/docs site:https://nlmixr2.github.io

Uses libs:
  • c++– GNU Standard C++ Library v3

On CRAN:

Conda:

monolixnlmixr2pharmacometricsrxode2cpp

4.06 score 1 stars 1 packages 19 scripts 365 downloads 20 exports 55 dependencies

Last updated from:ca1ffea087. Checks:13 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK269
linux-devel-x86_64OK265
source / vignettesOK284
linux-release-arm64OK243
linux-release-x86_64OK259
macos-release-arm64OK323
macos-release-x86_64OK296
macos-oldrel-arm64OK152
macos-oldrel-x86_64OK444
windows-develOK245
windows-releaseOK232
windows-oldrelOK237
wasm-releaseOK178

Exports:.getNbdoses.getStiff.monolixGetMlxtran%>%autoplotexpitinilogitlotrimlxtranmlxTxtmodelmodel<-monolix2rxrxodeRxODErxode2rxRenamerxSolverxUiGet

Dependencies:armadillo4rbackportsbase64encBHcachemcheckmateclicpp11cpp4rcrayondata.tabledescdigestdparserfarverfastmapggforceggplot2gluegtableinlineisobandjsonlitelabelinglifecyclelotrimagrittrMASSmemoisepolyclipPreciseSumsqs2R6RColorBrewerRcppRcppArmadilloRcppEigenRcppParallelrexrlangrxode2rxode2llS7scalessitmoStanHeadersstringfishstringisyssystemfontstidyselecttweenrvctrsviridisLitewithr