Package: rxode2parse 2.0.19.9000
Matthew L. Fidler
rxode2parse: Parsing and Code Generation Functions for 'rxode2'
Provides the parsing needed for 'rxode2' (Wang, Hallow and James (2016) <doi:10.1002/psp4.12052>). It also provides the 'stan' based advan linear compartment model solutions with gradients (Carpenter et al (2015), <doi:10.48550/arXiv.1509.07164>) needed in 'nlmixr2' (Fidler et al (2019) <doi:10.1002/psp4.12445>). This split will reduce computational burden of recompiling 'rxode2'.
Authors:
rxode2parse_2.0.19.9000.tar.gz
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rxode2parse.pdf |rxode2parse.html✨
rxode2parse/json (API)
NEWS
| # Install 'rxode2parse' in R: |
| install.packages('rxode2parse', repos = c('https://nlmixr2.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/nlmixr2/rxode2parse/issues
Last updated 10 days agofrom:5843d6daf8
Exports:.convertId.extraC.extraCnow.getLastIdLvl.getWh.linCmtSens.rxC.rxode2parseFunPtrs.rxSEeqUsr.rxTransInfo.symengineFs.toClassicEvid.udfCallFunArg.udfEnvReset.udfEnvSet.udfEnvSetUdf.udfExists.udfMd5InfoetTransParseforderForceBaserxDerivedrxFunParserxode2parserxode2parseAssignPackagesToLoadrxode2parseAssignPointerTranslationrxode2parseAssignTranslationrxode2parseDrxode2parseGetPackagesToLoadrxode2parseGetPointerAssignmentrxode2parseGetTranslationrxode2parseMd5rxParseSetSilentErrrxParseSuppressMsgrxRmFunParserxSetIni0
Dependencies:backportsBHcheckmatecrayondata.tabledigestdparserevaluatehighrknitrlazyevalqsRApiSerializeRcppRcppEigenRcppParallelrexStanHeadersstringfishsymenginexfunyaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| This converts NONMEM-style EVIDs to classic RxODE events | .toClassicEvid |
| Print Values | print.rxModelVars |
| Calculate derived parameters for the 1-, 2-, and 3- compartment linear models. | rxDerived |
| Internal translation to get model variables list | rxode2parse |
| This assigns the c level linkages for a roxde2 model | rxode2parseAssignTranslation |
| This gives the derivative table for rxode2 | rxode2parseD |
| Control the packages that are loaded when a 'rxode2' model dll is loaded | rxode2parseAssignPackagesToLoad rxode2parseGetPackagesToLoad |
| This function gets the currently assigned function pointer assignments | rxode2parseGetPointerAssignment |
| This function gets the currently assigned translations | rxode2parseGetTranslation |
| Get the MD5 hash of the current language revision | rxode2parseMd5 |
| Respect suppress messages | rxParseSuppressMsg |
| Set Initial conditions to time zero instead of the first observed/dosed time | rxSetIni0 |
